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Abstract Biodiversity collections in the United States hold over a billion specimens and are essential to understanding the history of life on Earth, as well as patterns of biodiversity in response to environmental change. Each specimen is linked by metadata to an organism's name and the place and time of its collection. Extensive data have been collected on Earth's geology, hydrology, climate, and organisms—past and present—but the data remain largely fragmented. We report in the present article on community discussions to develop a roadmap and identify action items for the Building an Integrated, Open, Findable, Accessible, Interoperable, and Reusable (BIOFAIR) Data Network, directly linking the various types of biological and environmental data. The roadmap is organized into five themes: stocktaking and gap analysis, technological capacity building, best practices, education and training, and community building. Together, these themes chart a path from initial resource inventories and skill building to infrastructure development, cross‑disciplinary collaboration, and the establishment of FAIR‑compliant workflows and governance.more » « less
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Summary Botanical gardens make unique contributions to climate change research, conservation, and public engagement. They host unique resources, including diverse collections of plant species growing in natural conditions, historical records, and expert staff, and attract large numbers of visitors and volunteers. Networks of botanical gardens spanning biomes and continents can expand the value of these resources. Over the past decade, research at botanical gardens has advanced our understanding of climate change impacts on plant phenology, physiology, anatomy, and conservation. For example, researchers have utilized botanical garden networks to assess anatomical and functional traits associated with phenological responses to climate change. New methods have enhanced the pace and impact of this research, including phylogenetic and comparative methods, and online databases of herbarium specimens and photographs that allow studies to expand geographically, temporally, and taxonomically in scope. Botanical gardens have grown their community and citizen science programs, informing the public about climate change and monitoring plants more intensively than is possible with garden staff alone. Despite these advances, botanical gardens are still underutilized in climate change research. To address this, we review recent progress and describe promising future directions for research and public engagement at botanical gardens.more » « less
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Premise of the StudyPhenological annotation models computed on large‐scale herbarium data sets were developed and tested in this study. MethodsHerbarium specimens represent a significant resource with which to study plant phenology. Nevertheless, phenological annotation of herbarium specimens is time‐consuming, requires substantial human investment, and is difficult to mobilize at large taxonomic scales. We created and evaluated new methods based on deep learning techniques to automate annotation of phenological stages and tested these methods on four herbarium data sets representing temperate, tropical, and equatorial American floras. ResultsDeep learning allowed correct detection of fertile material with an accuracy of 96.3%. Accuracy was slightly decreased for finer‐scale information (84.3% for flower and 80.5% for fruit detection). DiscussionThe method described has the potential to allow fine‐grained phenological annotation of herbarium specimens at large ecological scales. Deeper investigation regarding the taxonomic scalability of this approach is needed.more » « less
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